The nef cluster comes with 6 nodes equipped with Nvidia GPUs.
Typically, they are used with cuda or opencl to run some highly parallel computations. But you may also run OpenGL applications on them.
If order to do this, a X server must be running on the nodes, with no display settings. It’s easy to generate a xorg.conf file for this setup using nvidia-xconfig:
nvidia-xconfig -a --virtual=1920x1200 --use-display-device=none
Now you can start the X server manually:
/usr/bin/X :0 -ac -audit 0 -nolisten tcp
note: these steps are done by the administrator. All GPU nodes on nef (OAR) are running an X server.
Setup when running on the INRIA network
Now as a user, reserve a GPU node:
oarsub -I -p "gpu='YES'" -l /nodes=1,walltime=2:0:0
You now have a shell on nefgpuXX, start a vnc server:
vncserver -geometry 1920x1024
A lightweight window manager is installed on nef (fluxbox), so you may want to use use this .vnc/xstartup file:
#!/bin/sh vncconfig -iconic & unset SESSION_MANAGER unset DBUS_SESSION_BUS_ADDRESS [ -r $HOME/.Xresources ] && xrdb $HOME/.Xresources xsetroot -solid grey xterm -geometry 80x24+10+10 -ls -title "$VNCDESKTOP Desktop" & fluxbox
Run a vnc client on your desktop (krdc, vinagre, …). If you are on the production network, you can directly connect to the vnc server at nefgpuXX:5901
Start an xterm on the vnc. Now in order to use the GPU accelerated X, you have to use vglrun to start your application: You can test it with glxgears:
vglrun glxgears. virtualgl will use the local X server to render the application (using the GPU), and will display the result on the unaccelerated vnc.
If you have to run a qt5 application, don’t forget to add the
How to do it outside INRIA network
If you are not on the production network at sophia, it’s a bit more tricky.
Submit your job with an explicit private key (your local private key of nef with no passphrase)
oarsub -p "gpu='YES'" -k -i ~/.ssh/id_rsa -I -l /nodes=1,walltime=2:0:0
Copy this private on your laptop/workstation in
~/.ssh/id_rsa_nef, and don’t forget to
add a passphrase (
ssh-keygen -f id_rsa_nef -p)
Add this in your
.ssh/config (on your laptop/workstation)
Host *.nefoar ProxyCommand ssh nef-frontal.inria.fr -W "$(basename %h .nefoar):6667" User oar LocalForward 5901 127.0.0.1:5901 IdentityFile ~/.ssh/id_rsa_nef ForwardAgent no
Now you can connect to your gpu node to establish the ssh tunnel
You can connect to your vnc server on